Hello all,
We are running a 300v2 run on our miseq. Sadly, rta crashed during the first cycle. We tried restarting rta, but the process crashed over and over. Meanwhile, miseq continued to sequence and pile up raw data untill the D drive was completely full (200+ GB of raw data). Obviously the run stopped (at cycle 145) untill more space is cleared from d drive.
As the machine stopped sequencing, awaiting space on d drive, the internal computer has become more responsive and re launching rta at this point does not seem to crash it. However rta does not process the data that is waiting in the queue, instead it pops out error messages.
Does anyone know how we can continue the run? The first priority should be processing the data that is in the queueu now. As rta has crahed during cycle 1, no cluster densities have been reported ...
Any help would be appreciated !
We are running a 300v2 run on our miseq. Sadly, rta crashed during the first cycle. We tried restarting rta, but the process crashed over and over. Meanwhile, miseq continued to sequence and pile up raw data untill the D drive was completely full (200+ GB of raw data). Obviously the run stopped (at cycle 145) untill more space is cleared from d drive.
As the machine stopped sequencing, awaiting space on d drive, the internal computer has become more responsive and re launching rta at this point does not seem to crash it. However rta does not process the data that is waiting in the queue, instead it pops out error messages.
Does anyone know how we can continue the run? The first priority should be processing the data that is in the queueu now. As rta has crahed during cycle 1, no cluster densities have been reported ...
Any help would be appreciated !
Comment