Seqanswers Leaderboard Ad
Collapse
Announcement
Collapse
No announcement yet.
X
-
Originally posted by Gorgon_VZ View PostHi all and thanks for your suggestions! I already recognised pacBios Arabidopsis release. However, the Sequel-data comes in a "new" format (*.bam) and one needs to use smrt-link to visualise the data. Samtools seems not to be feasible to have a look into the binary files. Is anyone aware of a workaround to open or even convert the files? Maybe to make them suitable for import into smrt-portal?
@DNATECH: Very helpful info!
the new SEQUEL *.bam files are 100% compatible with samtools, we routinely use it internally and it's included as part of SMRTLink
Leave a comment:
-
Hi all and thanks for your suggestions! I already recognised pacBios Arabidopsis release. However, the Sequel-data comes in a "new" format (*.bam) and one needs to use smrt-link to visualise the data. Samtools seems not to be feasible to have a look into the binary files. Is anyone aware of a workaround to open or even convert the files? Maybe to make them suitable for import into smrt-portal?
@DNATECH: Very helpful info!
Leave a comment:
-
-
Hi All,
we have only run E.coli libraries with the new chemistry so far.
Last edited by DNATECH; 11-11-2016, 12:15 PM.
Leave a comment:
-
Hi all, has anyone tested the performance of the novel chemistry yet? Any experiences regarding loading efficiency, readoutput, dataquality and so on? I would really, appreciate any kind of information from all you sequel users out there!
Thanks!
Leave a comment:
-
seems like there is a surprising amount of misinformation. Thanks for clarifying.
Leave a comment:
-
I wonder if this chemistry release is the last one for this year or there will be another chemistry or SMRT cell update before next year.
Leave a comment:
-
There has never been an NDA for Sequel or its data. Also the updated chemistry is available for order and will start shipping to customers this week.
Leave a comment:
-
Originally posted by mbadgett View PostCheck out today's blog: http://http://www.pacb.com/blog/sequ...nome-assembly/
Leave a comment:
-
If I am correct the Sequel data in the blog are not from current chemistry.
Leave a comment:
-
It is currently in early access testing and released broadly thereafter, before the year end chemistry.
Leave a comment:
-
Is this using the August chemistry update or is it using the planned EOY chemistry update?
Leave a comment:
-
Originally posted by GenoMax View PostSo the burning question on everyone's mind. When do we get to see real data from Sequel in wild?
Leave a comment:
Latest Articles
Collapse
-
by seqadmin
The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...-
Channel: Articles
05-06-2024, 07:48 AM -
-
by seqadmin
The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...-
Channel: Articles
04-22-2024, 07:01 AM -
ad_right_rmr
Collapse
News
Collapse
Topics | Statistics | Last Post | ||
---|---|---|---|---|
Started by seqadmin, 05-10-2024, 06:35 AM
|
0 responses
19 views
0 likes
|
Last Post
by seqadmin
05-10-2024, 06:35 AM
|
||
Started by seqadmin, 05-09-2024, 02:46 PM
|
0 responses
21 views
0 likes
|
Last Post
by seqadmin
05-09-2024, 02:46 PM
|
||
Started by seqadmin, 05-07-2024, 06:57 AM
|
0 responses
19 views
0 likes
|
Last Post
by seqadmin
05-07-2024, 06:57 AM
|
||
Started by seqadmin, 05-06-2024, 07:17 AM
|
0 responses
21 views
0 likes
|
Last Post
by seqadmin
05-06-2024, 07:17 AM
|
Leave a comment: