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Hi all,
Integromics has released SeqSolve™, a new software for tertiary analysis of NGS data, currently focused on RNA-seq, with ChIP-Seq/Re-Seq modules to come soon. From a set of genomically aligned reads, SeqSolve performs a large panel of downstream analyzes: read characterization (number, length, redundancy, proportion in genes, exons, introns, UTRs), genomic coverage, statistics for differential gene expression, global density profiles within transcripts, exons, around functional sites, etc.
A key feature of SeqSolve is its Click and Go™ automatic processing along with a smart quality control which includes metrics like strand specificity, read complexity and gene coverage bias (Levin et al., 2010). It is implemented on the Tibco Spotfire® platform and provides results as interactive and easy-to-share graphs.
SeqSolve has already been validated in several projects, published in Nature (Kapranov et al., 2010) and Cell (Ozsolak et al., 2010).
For more information, please visit: www.integromics.com/ngs
Integromics has released SeqSolve™, a new software for tertiary analysis of NGS data, currently focused on RNA-seq, with ChIP-Seq/Re-Seq modules to come soon. From a set of genomically aligned reads, SeqSolve performs a large panel of downstream analyzes: read characterization (number, length, redundancy, proportion in genes, exons, introns, UTRs), genomic coverage, statistics for differential gene expression, global density profiles within transcripts, exons, around functional sites, etc.
A key feature of SeqSolve is its Click and Go™ automatic processing along with a smart quality control which includes metrics like strand specificity, read complexity and gene coverage bias (Levin et al., 2010). It is implemented on the Tibco Spotfire® platform and provides results as interactive and easy-to-share graphs.
SeqSolve has already been validated in several projects, published in Nature (Kapranov et al., 2010) and Cell (Ozsolak et al., 2010).
For more information, please visit: www.integromics.com/ngs