Here is my project:
- I have a group X of unknown strains of species A taken from, say, the oral cavities of a group of people. Each individual...
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Comparative bacterial genomics on groups of samples
Last edited by feralBiologist; 02-11-2016, 02:53 AM. -
Low budget workstation for analysing bacterial Illumina/454 sequencing data
Hi,
I would like to build a workstation that is capable of analysing Illumina and 454 sequencing data from bacterial samples on a £2000... -
download all available genomes by genus
Hi!
I`d like to get all bacterial genomes of some genus. There a lot of species already sequenced with a lot of strains as I can see in Genbank.... -
Mapping bacterial genome with BWA - best seed length and algorithm?
Hi There,
I am mapping bacterial genomes to a reference sequence and am wondering if anyone has experience or knowledge with the best algorithm... -
Bacterial RNA sequencing workflow for the PGM
Attached is a workflow describing how we isolated, ribo-depleted, and sequenced RNA from [I]E. coli[I] on the Ion Torrent PGM.... -
Classify Bacterial and Archaeal fragments from 454-Metagenome
Hello all,
I have just started working with 454 metagenome datasets and was wondering if there is any tool that can classify reads from 454 into... -
Experience with Tufts?
Hi,
I have a couple of projects for HiSeq sequencing, and after investigating a few different labs, I´m thinking of sending them to the... -
Comparing shotgun metagenomic reads: 454 vs HiSeq
Hello,
I am currently investigating the bacterial community in the gut of a KO mouse model whose phenotype appears to be connected to... -
TruSeq small RNA for directional sequencing
Has anybody tried the TruSeq small RNA sample prep kit to prepare libraries for directional mRNA sequencing? We would like to multiplex some bacterial...
