Hello all,
I have just started working with 454 metagenome datasets and was wondering if there is any tool that can classify reads from 454 into bacterial or archaeal sequences?
I have come across many tools that do something similar only for 16s rRNA.
Using a training dataset and word based classifier, can one divide the metagenome dataset into bacterial and archaeal sequences?
Thank you for your time!!
I have just started working with 454 metagenome datasets and was wondering if there is any tool that can classify reads from 454 into bacterial or archaeal sequences?
I have come across many tools that do something similar only for 16s rRNA.
Using a training dataset and word based classifier, can one divide the metagenome dataset into bacterial and archaeal sequences?
Thank you for your time!!
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