You want to work with bisulfite-treated sequencing (BS-Seq, Bisulfite-Seq, WGBS) data, but have no idea where to start?
Check this hands-on...
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Hands-On Workshop: How to use bisulfite-treated sequencing to study DNA methylation
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Extract annotated differentially methylated sites using methylkit
Hi everybody,
I've obtained differentially methylated sites and its annotation using the
R package called methylkit. What I want... -
Bismark Methyl-seq Analysis
We have sequenced a genome using Illumina's True-seq bisulfite sequencing kit. After getting back the seq, we are analyzing methylation rate using Bismark.... -
Up-to-date expert knowledge is the key to generating impactful biological insights
Up-to-date expert knowledge is the key to generating impactful biological
insights.
To address this unavoidable... -
Hands-On NGS Bioinformatics Workshops 2016
Advance your research. Understand NGS and analyze sequenced data yourself.
microRNA Analysis
September 21 - 23, 2016
microRNA... -
Hands-On NGS Bioinformatics Workshops 2016
Advance your research. Understand NGS and analyze sequenced data yourself.
microRNA Analysis
September 21 - 23, 2016
microRNA... -
Detection of differentially methylated regions (DMRs)
metilene: Fast and sensitive calling of differentially methylated regions from bisulfite sequencing data
The detection of differentially... -
Detection of differentially methylated regions (DMRs)
metilene: Fast and sensitive calling of differentially methylated regions from bisulfite sequencing data
The detection of differentially... -
Final Call: Epigenetics Workshop - DNA Methylation Data Analysis (15-17 Dec 2015)
DNA Methylation Data Analysis
How to use bisulfite-treated sequencing to study DNA methylation
Link to workshop page
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Large scale cancer RNA-Seq study - Loss of poising causes cell dedifferentiation
Link to bioRxiv
Cell de-differentiation is an important step towards tumor generation. A group in Leipzig shows upregulation of hundreds... -
Tools to determine sequence contamination in Methyl-Seq data ?
Hi,
I have a question regarding determining sequence contamination from Methyl-Seq experiments.
As we all know, for Methyl-Seq... -
Webinar on Methyl Seq data analysis in Strand NGS- Formerly Avadis NGS
This 23 July, find out how to perform Methyl Seq data Analysis on your next-gen sequencing analysis tool Strand NGS - formerly Avadis NGS!
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New ssDNA-capable bisulfite sequencing library prep kit: Early Access Program
Swift Biosciences has developed what we believe is a best-in-class bisulfite sequencing library preparation kit. We have just opened the Early Access...Last edited by swiftbiosci; 05-14-2014, 10:52 AM. -
differentially methylated sites with methylKit
I want to generate an outfile containing or C site (CG, CHG or CHH) that are differentially methylated (DM) using the R package methylKit
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Methylation Study
Hi,
I'm a PhD student and currently working on building up a Methylome of a plant species. I have a plant line which has been inbred for...
