Hello everybody!
I would like to ask for some help with files obtained with methratio script from bsmap.
I'm doing a RRBS...
5 results in 0.0028 seconds.
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Extract annotated differentially methylated sites using methylkit
Hi everybody,
I've obtained differentially methylated sites and its annotation using the
R package called methylkit. What I want... -
Comparing multiple treatment groups for DNA methylation (RRBS, methyl kit, GLM)
We have an RRBS dataset with 4 treatment groups, n=6 samples each group. I'd like to be able to do an ANOVA-style first stage analysis to look for evidence... -
Batch effect in Methylkit and SVA
Hello!
I have 6 RRBS samples that I am analyzing in MethylKit. After looking at the clustering and PCA plots it seems that there are batch... -
differentially methylated sites with methylKit
I want to generate an outfile containing or C site (CG, CHG or CHH) that are differentially methylated (DM) using the R package methylKit
...
