Dear all,
I hope you are doing well.
Firstly, I am sorry if my question looks naive, I am beginner in this field.
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26 results in 0.0032 seconds.
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Importing data from GEO to R for analysing
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Counting codons in RNA-seq data
I performed an experiment with a large RNA-seq dataset and I added mRNA stability assay to it. I want to analyze the factors that impact mRNA stability... -
Omics Playground Cloud Version
We recently developed a cloud-based version of our Omics Playground platform for the analysis of human and mouse transcriptomics and proteomics datasets.... -
best bioinformatic methods for identification of miRNAs for differential expression
Hi everyone,
I'm trying to find tools/pipelines in order to do the analysis of miRNAs from RNA-seq data, but I'm overwhelmed by the amount... -
Very low % of reads showing primary alignment to transcriptome
Dear users,
I have recently started analyzing RNA-Seq data for gene expression analysis, hence am quite new to the field.
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can I transform .tmap to .gtf/.gff?
Hello everyone,
Currently I am trying to identify novel lncRNAs. I just used cuffCompare and generate several files including .tmap file.... -
Transcriptome construction
Hello all
I wanted to ask that whether i can use both genome and transcriptome (generated using PacBio) as reference together and align... -
RNA-seq data not mapping to exon
We did RNA-seq on sperm cells. RNA is more on the degraded size. Because there is no good ribosomal removal kit for this species, we proceeded with KAPA... -
Issue with StringTie--not picking up reference gene IDs
Hello, I am using StringTie for RNA-seq analysis and want to use DESeq for differential gene expression analysis.
After running the command... -
How to get read-counts for sam files with transcriptome reference??
Hi,
I am working on rna-seq data analysis..
Mapped the reads to transcriptome reference (cDNA fasta file) for wheat using Bowtie2.... -
Webinar: Single-cell Analysis with Partek Flow - Identifying Cell Populations
Single-cell Analysis with Partek Flow: Identifying Cell Populations
Next generation sequencing analysis of single cell data has recently... -
Question: (ERR): bowtie2-align exited with value 1
Hi I have a problem when run tophat. I have recieved this massage:
Error running bowtie:
Warning: output file '-' was specified without... -
PhD in genomic analysis Sheffield Hallam University
PhD position in genomic analysis with Dr Lucy Crooks at Sheffield Hallam University, Department of Biosciences and Chemistry, UK
I have... -
Webinar: RNA-Seq with Enhanced Isoform Analysis
RNA-Seq with Enhanced Isoform Analysis
Presented by: Matthew Keyser
April 5, 2017 at 12:00 pm EDT
Our popular RNA-Seq workflow... -
Comparing RNA levels in tumor/normal samples using RNA-seq
Hi,
I'm starting a new cancer gene expression project using Illumina
RNA-seq fastq files for matched tumor/normal samples.
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