Hi, I have been running velveth and velvetg for mapping on a reference file (Columbus extension) but I am getting the following error:
...
10 results in 0.0021 seconds.
-
Velvet Columbus (No roadmap)
-
velvetg coverage parameter
Hi everyone, I am new with Velvet and I have some questions regarding velvetg parameters.
I am doing the de novo assembly for my Illumia... -
why I have a velvetg blank script?
Hey there,
I came across this really odd situation and have no idea about what to do. I’ve just installed Velvet-1.2.10 and realized that...Last edited by leonardo_ca; 04-05-2018, 12:44 PM. -
Assembly paired-end sequences with Velvet
I have sequences from illumina HiSeq 2000. I'll show you the sequence data that I have a bacteria.
fernando@InvDllo04[Lactobacillus] grep... -
velvet columbus reference errors
I have seen some posts about using velvet with a reference, but they have not helped me........
I am trying to assemble a plant genome using a... -
Velveth output files
Hi, I am basically wondering which files velveth should produce as I have only been produced with Log, Roadmaps and Sequences in the out-dir folder. ... -
Velvet merged dataset
Hi, my issue is that I recieved data which had already been merged and trimmed and so I have binned it to smaller sizes and am about to finally assemble... -
unknown option -shortPaired3 in velveth
Hi,
I am trying to assemble three paired-end libraries, but get an error with the option -shortPaired3. Anyone know if I can assemble more... -
Velvet 1.2.10 failing velveth (no contigs)
Greetings!
I have used velvet with success before, but I seem to be missing something this time.
The data is paired-end... -
help using velvet for de novo assembly
Hi everyone, i'm trying to run de novo assembly using velvet on short (100bp long) paired end reads.
I first ran velveth and it created only two...
