22 results in 0.0030 seconds.
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Viral Genome reconstruction
Hi! I have some reads from sequencing a viral genome. We are analyzing readings with two matches, and we calculate the existing distance between both... -
does the Oragene saliva kit lyse coronavirus?
Does anybody know if the Oragene DNA saliva collection kits(s) lyse coronavirus? -
Align unmapped reads to virus genomes
Hello,
I am trying to determine how much of the unmapped reads from a transcriptome study align to viruses. My procedure so far has been...Last edited by SuzuBell; 10-23-2018, 05:45 PM. -
Where to start for sequence analysis of 24 virus Illumina Miseq
Hello Folks
We have run 24 influenza virus samples on our MiSeq and obtained 48 FASTQ files (R1 + R2 for each). We also got 24 Contig files.... -
4th Annual Viral Genomics & Bioinformatics Training Course (20-24 August 2018)
The MRC-University of Glasgow Centre for Virus Research (CVR) has been running a successful training course on Viral Bioinformatics and Genomics annually... -
Post-Doc positions developing NGS to study RNA virus evolution at UTMB, Texas.
We have immediate openings for talented post-doctoral scholars in a new laboratory at the University of Texas Medical Branch (UTMB) located in Galveston,... -
Viral metagenomics sample with a high concentration of bacteria
Hi all,
I have analyzed a total of 7 samples coming from the bacteriophage fraction of human faeces. Purification included resuspension of...Last edited by chariko; 12-04-2015, 04:02 AM. -
How analyze DNA's reads by HiSeq-2000?
I need to analyze reads of viral DNA by deep sequencing using HiSeq-2000. I'll check the substitutions throughout the genome and identify the viral virants,... -
CAPPED-mRNA sequencing
Hi,
Has anyone tried to enrich for capped-mRNA (of virus)vfrom total mRNA?
if yes, what kind of method did you use?
I know... -
BLASTn virus with CLC
Hello
I am a newcomer to bioinformatics, and need your assistance.
I bought CLC Genomics Workbench, and started with... -
Best classifier for viral reads--PhyloSift? BLAST? Others?
I'm trying to compare methods of classifying RNA and DNA virus reads from metagenomic sequeincing data. I've got MetAMOS set up, and I'm mainly interested... -
ViReMa: an algorithm for finding viral recombination or fusion events in NGS data
Hi all,
I have written and made available an algorithm I wrote in Python called ViReMa: a Viral Recombination Mapper.
The... -
Virus polymorphism Segminator
I have been using GATK tools (mapping done with Mosaik) and Segminator II (using FASTQ data) to map polymorhism in virus resequencing (Ion Torrent). Comparing... -
genome coverage
Hi,
Which one do you think is the best and easier alternative to Picard Statistics to measure basic genomic metrics, such as virus genome... -
RNA-Seq: Deep sequencing reveals abundant noncanonical retroviral microRNAs in B-cell
Deep sequencing reveals abundant noncanonical retroviral microRNAs in B-cell leukemia/lymphoma.
Proc Natl Acad Sci U S A. 2013 Jan 23...Last edited by NicoBxl; 02-06-2013, 03:11 AM.
