I'm sorry if this is a naive question, but I get an odd thing going on. I'm performing blast remotely in this way:
blastn -task megablast -outfmt...
12 results in 0.0057 seconds.
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Wrong blast results
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Passed FastQC - but adapters still present?
Hi there - I am brand new to both Bioinformatics and this forum so I hope I'm posting in the right place; and that my questions make sense!
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MiSeq boots to grey screen with mouse cursor
We just had our MiSeq fail. System lockup and then a hard reboot/reset gets me to a grey screen with a mouse cursor - no response.
I suspect... -
Tophat2 on Windows 7.
Hi,
For some (not-logical reasons) we are building our RNA pipeline on Windows. This is mainly due to biological people prefering to work... -
[Bowtie2] Not recognized on Windows.
I'm trying to run bowtie2 to align my sequence data. Bowtie2 says its better to run the bowtie2 file instead of the wrapper bowtie2-align directly. However... -
Compile Blat for Windows x64
Hello,
I am looking for a 64bit version of the USCS genome tool Blat. I have found 32bit executable that run on windows, but I am unable... -
Could not find function 'estimateDispersion' error
Hi..
I'm running DESeq (2.11) on R (2.25.2) on windows 7 . I'm getting following error,
Error: could not find function "estimateDispersion"... -
Bioinformatics on Windows and Windows Cloud
For those 92.2% desktop users out there:
http://en.wikipedia.org/wiki/Usage_s...rating_systems
BOW http://bow.codeplex.... -
whether windows bioinformatics software be mainstream one day?
Hi everyone,
Nowdays more and more people do bioinformatics, and more and more software are developed. Most of them are based on linux , Linux... -
What's the best assembler for 454 reads?
Hi,
I would like to know what is the best assembler for 454 reads (Free software, if possible)?
I'll sequence viral genomes and... -
Announce BWA on Windows x64
Dear all,
Now the source code is on https://github.com/xied75/bwa
The main site is still http://bow.codeplex.com/
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Help with ABACAS
I'm currently trying to use ABACAS: Algorithm-based automatic contiguation of assembled sequences. However, I'm a bit confused as how to get it running....
