Compile Blat for Windows x64

[voxon2]

Hello,

I am looking for a 64bit version of the USCS genome tool Blat. I have found 32bit executable that run on windows, but I am unable to find a 64bit version.

Has anyone successfully run a 64bit version of blat on windows?

Thanks

[GenoMax]

Have you tried compiling it yourself on the 64-bit version of Cygwin (http://users.soe.ucsc.edu/~kent/src/)?

[voxon2]

Thanks for your reply. Things are working now.

Not sure what I did different other than installing cygwin on a different computer but the software compiles no problem now. I had to add a few reference to libpng and another library that was mentioned but I am able to compile and run the 64 bit version.

All the best,