We have been using this tool for assembling eukaryotic genomes from a long time now but have never encountered an error message "Trace: can't find kmer 0 0 0 2914096dd4 (input 0 0 0 2f74f2afb0) at step 1 " at all. The output file is full of these errors and we are not able to workout where the issue. Is could you please tell us what this error actually means ?
A few more error lines
"Trace: can't find kmer 0 0 0 2914096dd4 (input 0 0 0 2f74f2afb0) at step 1
Trace: can't find kmer 0 0 0 114096dd4c (input 0 0 0 26f74f2afb) at step 0
Trace: can't find kmer 0 0 0 5025b7531 (input 0 0 0 39bdd3cabe) at step 0
Trace: can't find kmer 0 0 0 5025b7531 (input 0 0 0 39bdd3cabe) at step 1
Trace: can't find kmer 0 0 0 1025b75319 (input 0 0 0 339bdd3cab) at step 0
Trace: can't find kmer 0 0 0 4cacf100 (input 0 0 0 2ab96426e) at step 1
Trace: can't find kmer 0 0 0 acf100ac (input 0 0 0 242ab9642) at step 0
Trace: can't find kmer 0 0 0 acf100ac (input 0 0 0 242ab9642) at step 1
Trace: can't find kmer 0 0 0 96dd4c66 (input 0 0 0 ce6f74f2a) at step 0"
I really appreciate your help in this matter.
Thanks a lot.
A few more error lines
"Trace: can't find kmer 0 0 0 2914096dd4 (input 0 0 0 2f74f2afb0) at step 1
Trace: can't find kmer 0 0 0 114096dd4c (input 0 0 0 26f74f2afb) at step 0
Trace: can't find kmer 0 0 0 5025b7531 (input 0 0 0 39bdd3cabe) at step 0
Trace: can't find kmer 0 0 0 5025b7531 (input 0 0 0 39bdd3cabe) at step 1
Trace: can't find kmer 0 0 0 1025b75319 (input 0 0 0 339bdd3cab) at step 0
Trace: can't find kmer 0 0 0 4cacf100 (input 0 0 0 2ab96426e) at step 1
Trace: can't find kmer 0 0 0 acf100ac (input 0 0 0 242ab9642) at step 0
Trace: can't find kmer 0 0 0 acf100ac (input 0 0 0 242ab9642) at step 1
Trace: can't find kmer 0 0 0 96dd4c66 (input 0 0 0 ce6f74f2a) at step 0"
I really appreciate your help in this matter.
Thanks a lot.