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  • Optimal k-mer and N50?

    Hi

    I am a new hand for De novo discovery, I find Velvet and ABySS require K-mers, I have single-end SOLiD data and think to know how to get optimal k-mer and N50.

    Can everyone give me some paper for K-mer or N50?

    Thanks for any comments in advance.
    I am looking forward to your letter

  • #2


    there are a ton of links here.

    please do some research and come back with a precise question.
    --
    Jeremy Leipzig
    Bioinformatics Programmer
    --
    My blog
    Twitter

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