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Hello SeqAnswers community ,
I am new to NoME-seq and I have a few questions.
Firstly, is there any advantage of going with paired end read versus single end reads, and second, what is a good starting total reads required i.e 100,200 300 million ? We are interested in mapping nucleosome occupancy differences at repetitive elements between treatment and control groups. Thanks!
Dennis
I am new to NoME-seq and I have a few questions.
Firstly, is there any advantage of going with paired end read versus single end reads, and second, what is a good starting total reads required i.e 100,200 300 million ? We are interested in mapping nucleosome occupancy differences at repetitive elements between treatment and control groups. Thanks!
Dennis