significant peaks in WIG format

[fsher]

Dear Colleagues,

I used CLC genomic workbench to analyze my ChIP-Seq data (using Illumina platform) I used its peak finding option to screen the target sites.

Now referees are asking me to present the data in WIG format, I could not figure out how to do that using CLC.

I was wondering if there is possibility in CLC. to show the peaks in WIG format and any comparable format which can be used for UCSC genome browser. Help and comments are welcome.

Thanks for the help,
fsher

[nilshomer]

Dear Colleagues,

I used CLC genomic workbench to analyze my ChIP-Seq data (using Illumina platform) I used its peak finding option to screen the target sites.

Now referees are asking me to present the data in WIG format, I could not figure out how to do that using CLC.

I was wondering if there is possibility in CLC. to show the peaks in WIG format and any comparable format which can be used for UCSC genome browser. Help and comments are welcome.

Thanks for the help,
fsher

What did the support from CLC bio suggest? What is the native format?

[fsher]

thank you for your quick response.

I have sent request to support, still did not hear anything from them. could you please clear what you mean by native format, is it the format of sequence files ?