I've got a question about using mpileup on multiple library data:
is there any difference in variant calling between
- run mpileup with multiple bam files as input,
and
- merge these bam files then run mpileup on the merged one
Thanks much for your input.
is there any difference in variant calling between
- run mpileup with multiple bam files as input,
and
- merge these bam files then run mpileup on the merged one
Thanks much for your input.
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