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  • Richard Finney
    Senior Member
    • Feb 2009
    • 701

    TCGA : capture vs. exome question?

    I have a question about TCGA (Cancer Genome Atlas) but it may be general question. They have many bam files available to researchers of various types: whole,exome,capture,rnaseq,mirna. Capture and Exome both have reads mainly aligned to exomes. Is there a difference between "capture" and "exome" ? Or is it just differing names for the same thing?
  • stanford_genome_tech
    Junior Member
    • Aug 2009
    • 7

    #2
    PRobably the same thing. I know that a number that the participating genome centers are using exome sequencing generally. Subset of targets occurred during the earlier studies before they launched into the twenty in production.

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