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  • fanyucai1
    Member
    • Jan 2011
    • 11

    #1

    how to get gene abundance

    hi,everyone, i have some metagenomics data. I have predicted genes from contig. Are there some softwares or method to get gene abundance?
    thanks!!!
  • sphil
    Senior Member
    • Apr 2010
    • 192

    #2
    create a gff with your genes your just found denovo. then, you can use almost every software for quantification since you got the genome (your contigs) and the genes..

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