Are there any binning programme available to do binning just on the basis of coverage and GC % ?
I used SPAdes to generate assembly and then MetaBAT for binning. I get few bins that are really large in size (~15mbp). So, Now I am looking for a potential binning programme that can be use as post binning method and bin contigs on the basis of their coverage and GC% only and not consider di-tetra nucleotides frequency in account.
Thanks.
Sandeep
I used SPAdes to generate assembly and then MetaBAT for binning. I get few bins that are really large in size (~15mbp). So, Now I am looking for a potential binning programme that can be use as post binning method and bin contigs on the basis of their coverage and GC% only and not consider di-tetra nucleotides frequency in account.
Thanks.
Sandeep