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  • ibn.adam
    Junior Member
    • Aug 2011
    • 8

    how to combine .gz files and extract?

    Dear all,

    I am new to RAN seq. Normally I get two sequence.txt files that I can easily run on tophat.

    now I have got RNA seq results that are in many .txt.gz files. I am told first I have to combine all theses files and then I can extract sequence.txt files.

    can anybody inform me the command to combine (not compress) all these .txt.gz files.

    thank you
  • westerman
    Rick Westerman
    • Jun 2008
    • 1104

    #2
    zcat *.txt.gz > my_output_file

    This is the same as

    gzip -dc *.txt.gz > my_output_file.

    'man gzip' is your friend. :-)

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