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magarolo

Junior Member

Join Date: Aug 2011

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Cuffcompare and Cuffdif

10-19-2011, 07:19 AM

Hello,

Could anyone give me a hint how to understand the output coming from Cuff-compare and Cuff-diff? I got several files and I do not know exactly how to proceed. Is it possible to see new transcripts coming up in the isoform file?

Many thanks for your help,
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