Hello.
Does anybody use Tophat-Cufflinks for RNA sequencing analysis?
I want to know how to use these tools but I can not find any small datasets which give some correct results.
I have tried to run Tophat with test_data from their site but it is only one very small sample and Cufflinks gives only empty results for this input data.
When I try to find a bigger data then it is usually some 1.5-2 Gb of short-reads, and it is handled too long. But I want to see some very small examples which gives non-empty results.
Could you share with me some small test datasets for the tools, please?
Does anybody use Tophat-Cufflinks for RNA sequencing analysis?
I want to know how to use these tools but I can not find any small datasets which give some correct results.
I have tried to run Tophat with test_data from their site but it is only one very small sample and Cufflinks gives only empty results for this input data.
When I try to find a bigger data then it is usually some 1.5-2 Gb of short-reads, and it is handled too long. But I want to see some very small examples which gives non-empty results.
Could you share with me some small test datasets for the tools, please?
Comment