Am having a query for uploading the custom tracks. I need to know that if I want to visualize the RNA-Seq data then I have to upload the bigwig file for the same right? So lets say I have 1 patient with tumor and the conditions are having center and periphery of tumor. So for that patient I have RNA -Seq data of 4 samples with a center of tumor, periphery of tumor , recurrent center of tumor and recurrent periphery. So I want to view the data in Genome Browser. in order to do that I should convert all the BAM files of all the four and create a bigwig files for each and then add them using add custom tracks in the browser right?
Please let me know , this might be very naive but am a bit confused
Please let me know , this might be very naive but am a bit confused