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Hi all,
I am using cummeRbund to visualize the results of multiple separate cuffDiff analyses. I would like to combine the results to visualize all of these runs on the same graph. Each cuffDiff run was of the format condition A vs condition B, C, or D, etc. Similarly, the results are reported as "q1" vs "q2" where "q1" is always condition A, but "q2" could be condition B, C, or D.
Does anyone know if or how i can combine these cuffData sets in R to visualize the results from multiple experiments simultaneously? I have tried combining the ggplot objects created by cummeRbund but have thus far not had any luck.
Any suggestions would be MUCH appreciated. Thanks!
I am using cummeRbund to visualize the results of multiple separate cuffDiff analyses. I would like to combine the results to visualize all of these runs on the same graph. Each cuffDiff run was of the format condition A vs condition B, C, or D, etc. Similarly, the results are reported as "q1" vs "q2" where "q1" is always condition A, but "q2" could be condition B, C, or D.
Does anyone know if or how i can combine these cuffData sets in R to visualize the results from multiple experiments simultaneously? I have tried combining the ggplot objects created by cummeRbund but have thus far not had any luck.
Any suggestions would be MUCH appreciated. Thanks!
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