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  • ej_duncan
    Junior Member
    • Sep 2013
    • 3
    #1

    individual variation in exon usage

    Hi Everyone,

    Anyone know of a way of comparing differences in exon usage between individual samples?

    I a single tissue type from four individuals and am looking to correlate differences in exon usage with differences in DNA methylation.

    I have (for my other projects) been using DEXseq, but this project is designed differently i.e. there are no 'replicates' and no 'treatment'. I want to identify differences in splicing (even if those differences are only in one individual).

    Any help/hints/tips would be fantastic (I am a biologist dabbling in some bioinformatics).

    -Liz
    Tags: None
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