CummeRbund for R 3.0.3

[vsindorf]

Apparently my version of R is too new (version 3.0.3) to run CummeRbund. When When I try to load it it tells me to re-install it and when I try to install it it says "package cummerbund is not available for R version 3.0.3".

So. What do I do?

Can I trick R into loading the cummerbund library?
Can I downgrade my R version?

Any advise would be greatly appreciated.

Thanks!
Tori

[blancha]

Works fine in R-3.1.0.

It's cummeRbund and not cummerbund anyway.

[blancha]

To elaborate on my previous answer, just copy-paste the following 2 commands in your R console. It should work. Note the capital R in cummeRbund (and that I am installing from the BioConductor repository).

source("http://bioconductor.org/biocLite.R")
biocLite("cummeRbund")

There are many issues with CummeRbund, but it can be installed in the most recent versions of R.

[jcherone]

I get the following error:

Error in get(".BioC_version_associated_with_R_version", envir = asNamespace("tools"), :
variable ".BioC_version_associated_with_R_version" was not found

[blancha]

What is the output of sessionInfo()

Are you running an older version of R? That could be a problem.

[jcherone]

Thanks for the reply. Yes, the issue was bc it was an older version. Updated and the problem is fixed.