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  • adamhfreedman
    Junior Member
    • Oct 2010
    • 8
    #1

    mmseq gzip error

    I'm running mmseq to calculate expression from STAR (2-pass) alignments. Mmseq completes just fine, no errors in stderr/stdout. But, it seems that the *gz files I need to run mmcollapse are somehow incomplete/malformed.

    zcatting any of the resulting files give an:

    invalid compressed data--crc error

    error.

    anyone else run into this/know the solution?
    Adam H. Freedman
    Dept. of OEB, Harvard University
    Tags: mmcollapse, mmseq, star
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