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I am looking for a Next Generation Sequencing Data Analysis workshop in Italy for this year. I am mostly interested in RNA-seq technologies, like SAMtools, Tophat2, Bowtie... Can anyone help me? Do you now any source to find one?
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The only one I can think of, in Bressanone/Brixen, focuses on R/Bioconductor
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You should not strictly need to wait for workshops to learn RNAseq data analysis. You can actually do a lot on your own. There are courses on edX, coursera that are more formal but you will find many other learning resources on the net.
You have the entire @SeqAnswers community behind you should you need help.
If you prefer a workshop format then this one is in Germany: http://seqanswers.com/forums/showthread.php?t=64508 in February 2016.Comment
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Love this - good data definitely starts from good input, and poor input can only give relatively poor data. I particularly like the mention of Nanodrop/absorbance based methods for quantification. It's such a toss up if you'll get an accurate reading or what amounts to a randomly generated number, and a lot of library/sequencing related issues can be traced back to poor quant.07-01-2026, 11:43 AM
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I’m not a sequencing expert. I’m a purification scientist who uses NGS to evaluate workflows my group develops. With this perspective, we think about the sample first and the NGS workflow second. The sequencer is an exceptionally honest reporter, but it can only report on what you give it, so whether you get clean, interpretable data from an NGS workflow is largely determined before you begin.
Here are nine questions we think about, in roughly the order they matter, before...
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