How to identify protein isoforms

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leontovyc_roman

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Join Date: Aug 2016

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How to identify protein isoforms

04-12-2017, 05:20 AM

Hi all,

I have set of proteins (peptidases) downloaded from NCBI. I'm not sure if some of them are coded by different genes or they are different splice variants from same gene. I have reference genome, so it wouldn't be so hard to determine it by mapping to reference. Please do you have some tools/wokflows/scripts how to proceed?

Thanks in advance

Roman
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