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  • RSEQtools

    Did anyone has experience with this package?

    I have problem when I use "sam2mrf" to convert my sam file from TopHat to mrf format.

    $ sort -r accepted_hits.sam | sam2mrf

  • #2
    Even I am unable to use sam2mrf provided by prebuilt binaries of RSEQtools, can anybody pls help?
    The command I tried was "sort -r file.sam | sam2mrf > file.mrf"
    as specified in the manual for the alignment file generated by tophat but it didnt work.

    please reply soon.

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