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  • Fritz_Doll
    Junior Member
    • Dec 2010
    • 1

    #1

    MAQ Map/Match Problem

    I cannot get the map/match function to work. The test i ran was that I copied 5 sequences from the fasta file (that was used as the .bfa) and copied them into a quick file that was saved as a fasta then converted over to fastq then the .bfq, I tried running that but they aren't aligning. Any Ideas?
  • nanlandetian
    Junior Member
    • May 2012
    • 1

    #2
    I`m sorry ,I`m a freshman in WGS ,and my English is poor,so what are the difference between map and match ,and how can we use -a and -A in map ,manual are ambiguous,anyone can give me some advices ,thanks advance!
    ooo

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