Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • NDUFB11
    Member
    • Jul 2017
    • 34

    #1

    FastQC and firefox

    Hello everyone,
    I want to perform a quality control of a fastq file.

    so I run this line

    patrizio$ fastqc --outdir raw/ raw/SRR359063_1.fastq.gz

    and I have this

    Analysis complete for SRR359063_1.fastq.gz

    which looks fine but when I want to see the result on firefox it doesn't work,

    Patrizios-MBP: processing patrizio$ firefox raw/SRR359063_1_fastqc.html

    -bash: firefox: command not found


    can you please tell me what the reason?

    thank you
  • GenoMax
    Senior Member
    • Feb 2008
    • 7142

    #2
    Open any web browser you like and then navigate to that html file and open it. There is nothing special about firefox.

    Comment

    • NDUFB11
      Member
      • Jul 2017
      • 34

      #3
      I did it

      Thank you

      -P

      Comment

      Latest Articles

      Collapse

      • SEQadmin2
        Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
        by SEQadmin2



        Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

        Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
        ...
        10-14-2026, 09:55 AM
      • SEQadmin2
        New Genomics Technologies Take Aim at Long-Standing Limits
        by SEQadmin2


        Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.

        We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing
        ...
        09-28-2026, 10:25 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by SEQadmin2, 10-15-2026, 10:52 AM
      0 responses
      31 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-14-2026, 05:39 AM
      0 responses
      39 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-13-2026, 09:56 AM
      0 responses
      31 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-09-2026, 11:14 AM
      0 responses
      29 views
      0 reactions
      Last Post SEQadmin2  
      Working...