how to create own junction libraries

[dimi]

Hi all,

I'm quite new to the field and I'm playing around analyzing some RNA-seq data from S. pombe. I'd like to use/create exon-junction libraries for S. pombe. Any ideas where to look for coordinates and sequences of the exon junctions?

TIA,
dimi

[louis7781x]

Hi all,

I'm quite new to the field and I'm playing around analyzing some RNA-seq data from S. pombe. I'd like to use/create exon-junction libraries for S. pombe. Any ideas where to look for coordinates and sequences of the exon junctions?

TIA,
dimi

Go to this page

http://info.gersteinlab.org/RSEQtools/workflow