Unconfigured Ad

Collapse
X
 
  • Filter
  • Time
  • Show
Clear All
new posts
  • robelb4
    Member
    • Jul 2011
    • 10

    Using MIRA assembler for illumina sequence

    Hello,
    I'm trying to use ,MIRA assembler on a small data which is sequenced using illumina. But the instruction on the MIRA manual is for mapping using another file as a backbone.
    Is any one knows how to perform de novo assembly using MIRA for illumina reads??

    thanks,

    Robel hailu

  • robelb4
    Member
    • Jul 2011
    • 10

    #3
    themerlin,

    Thanks

    Comment

    • pari_89
      Member
      • Apr 2013
      • 55

      #4
      Originally posted by robelb4 View Post
      Hello,
      I'm trying to use ,MIRA assembler on a small data which is sequenced using illumina. But the instruction on the MIRA manual is for mapping using another file as a backbone.
      Can you please give me the link where mapping assembly instruction was given for mira?
      I want to assemble reads against reference using iontorrent data.

      THank you.

      Comment

      Latest Articles

      Collapse

      • SEQadmin2
        Nine Things a Sample Prep Scientist Thinks About Before Sequencing
        by SEQadmin2


        I’m not a sequencing expert. I’m a purification scientist who uses NGS to evaluate workflows my group develops. With this perspective, we think about the sample first and the NGS workflow second. The sequencer is an exceptionally honest reporter, but it can only report on what you give it, so whether you get clean, interpretable data from an NGS workflow is largely determined before you begin.

        Here are nine questions we think about, in roughly the order they matter, before...
        06-18-2026, 07:11 AM
      • SEQadmin2
        From Collection to Sequencing: Why Sample Preparation and Preservation Define Sequencing Data
        by SEQadmin2


        Data variability is still an issue in sequencing technologies despite the advances in reproducibility and accuracy of these platforms. But the problem does not originate in the sequencing itself, but in the previous steps, before the sample reaches the sequencer.


        The first step is collection, followed by preservation and sample preparation for analysis. Most scientists overlook those steps, but not being careful might just be skewing the experiment’s results.
        ...
        06-02-2026, 10:05 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by SEQadmin2, Today, 05:37 AM
      0 responses
      5 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 06-26-2026, 11:10 AM
      0 responses
      16 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 06-17-2026, 06:09 AM
      0 responses
      49 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 06-09-2026, 11:58 AM
      0 responses
      109 views
      0 reactions
      Last Post SEQadmin2  
      Working...