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  • EGGS
    Junior Member
    • Sep 2011
    • 3

    #1

    Which Mira version should I install?

    My home directory is on a linux cluster (SunOS i86pc i386 i86pc). I downloaded the lates version of Mira, but it always tells me "command not found". Which version should I install? Did I make other mistakes?

    And what is the correct command to unpack the file? Why didn't I see a "bin" folder after unpacking?

    Thank you very much!
    Last edited by EGGS; 10-18-2011, 11:48 AM.
  • maubp
    Peter (Biopython etc)
    • Jul 2009
    • 1544

    #2
    Which file did you download? MIRA offers both precompiled binaries, and a source code bundle. If you get the source code you must compile it.

    Comment

    • EGGS
      Junior Member
      • Sep 2011
      • 3

      #3
      Originally posted by maubp View Post
      Which file did you download? MIRA offers both precompiled binaries, and a source code bundle. If you get the source code you must compile it.
      Thanks maubp. What I downloaded is "mira-3.4.0.tar.bz2". I used "bzip2 -dc mira-3.4.0.tar.bz2|tar -xf -" to unpack it.

      I don't understand the difference between precompile binaries and sournce code bundle. I read the installation very carefully but still don't understand I saw all files (older version or newest version) are tar.bz2 files. Can you please tell me the difference and what "compile" means?

      Many many thanks!!!!

      Comment

      • maubp
        Peter (Biopython etc)
        • Jul 2009
        • 1544

        #4
        See http://en.wikipedia.org/wiki/Compiler

        mira_3.4.0_prod_linux-gnu_x86_64_static.tar.bz2 = pre-compiled for 64bit Linux

        mira_3.4.0_prod_linux-gnu_i686_32_static.tar.bz2 = pre-compiled for 32bit Linux

        mira-3.4.0.tar.bz2 = source code which you must compile yourself (e.g. if using Mac OS X).

        If you have a 32bit Linux machine, try the 32bit binaries. If you have a 64bit Linux machine, try the 64 bit binaries. Otherwise you'll have to compile it yourself...

        Comment

        • Bukowski
          Senior Member
          • Jan 2010
          • 388

          #5
          Originally posted by EGGS View Post
          Thanks maubp. What I downloaded is "mira-3.4.0.tar.bz2". I used "bzip2 -dc mira-3.4.0.tar.bz2|tar -xf -" to unpack it.

          I don't understand the difference between precompile binaries and sournce code bundle. I read the installation very carefully but still don't understand I saw all files (older version or newest version) are tar.bz2 files. Can you please tell me the difference and what "compile" means?

          Many many thanks!!!!
          If you read the documentation:
          http://mira-assembler.sourceforge.ne...tion_part.html

          The install instructions are in the INSTALL file in the source package for MIRA

          That can be downloaded from here:

          Free, secure and fast downloads from the largest Open Source applications and software directory - SourceForge.net


          MIRA has a lot of dependencies and the last time I checked SunOS != Linux, so there are *no* precompiled binaries for your system.

          MIRA should compile on Solaris/OpenSolaris but according to the documentation 'some care is needed'. You may wish to talk to your systems administrator to help you get the package installed.

          Comment

          • EGGS
            Junior Member
            • Sep 2011
            • 3

            #6
            Thanks a lot!

            I didn't know Solaris is not linux (it's unix, right?). I did try "mira_3.4.0_prod_linux-gnu_i686_32_static.tar.bz2" as Bukowski suggested. But when I execute it, it tells me "Segmentation Fault (core dumped)". Does that indicate the program doesn't fit?

            I will have to figure out how to compile it on Solaris. Thanks a lot for you guys!

            Comment

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