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I have tried zorro on a genome of 450 MBp and I advise you not to try this. It is far too slow and basically unusable on a genome of this size.
I work on a project together with the developers of GAM and although nothing is public yet (and I am not sure when it will be) I have been testing an updated version designed to handle NGS assemblies and the results are excellent and the speed is also great. I will talk to the developer to ask when a public release could be possible.
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by seqadmin
The complexity of cancer is clearly demonstrated in the diverse ecosystem of the tumor microenvironment (TME). The TME is made up of numerous cell types and its development begins with the changes that happen during oncogenesis. “Genomic mutations, copy number changes, epigenetic alterations, and alternative gene expression occur to varying degrees within the affected tumor cells,” explained Andrea O’Hara, Ph.D., Strategic Technical Specialist at Azenta. “As...-
Channel: Articles
07-08-2024, 03:19 PM -
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Started by seqadmin, 07-25-2024, 06:46 AM
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07-25-2024, 06:46 AM
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Started by seqadmin, 07-24-2024, 11:09 AM
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07-24-2024, 11:09 AM
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Started by seqadmin, 07-19-2024, 07:20 AM
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07-19-2024, 07:20 AM
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Started by seqadmin, 07-16-2024, 05:49 AM
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07-16-2024, 05:49 AM
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