Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • natstreet
    replied
    I have tried zorro on a genome of 450 MBp and I advise you not to try this. It is far too slow and basically unusable on a genome of this size.

    I work on a project together with the developers of GAM and although nothing is public yet (and I am not sure when it will be) I have been testing an updated version designed to handle NGS assemblies and the results are excellent and the speed is also great. I will talk to the developer to ask when a public release could be possible.

    Leave a comment:


  • flobpf
    started a topic Zorro maximum size

    Zorro maximum size

    Hi,

    The excellent Zorro assembly merging tool says that the authors have tested genomes till 100MB. Does anyone have any experience of Zorro with larger genomes? What about GAM?

    Thanks

Latest Articles

Collapse

  • seqadmin
    Exploring the Dynamics of the Tumor Microenvironment
    by seqadmin




    The complexity of cancer is clearly demonstrated in the diverse ecosystem of the tumor microenvironment (TME). The TME is made up of numerous cell types and its development begins with the changes that happen during oncogenesis. “Genomic mutations, copy number changes, epigenetic alterations, and alternative gene expression occur to varying degrees within the affected tumor cells,” explained Andrea O’Hara, Ph.D., Strategic Technical Specialist at Azenta. “As...
    07-08-2024, 03:19 PM

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by seqadmin, Yesterday, 06:46 AM
0 responses
9 views
0 likes
Last Post seqadmin  
Started by seqadmin, 07-24-2024, 11:09 AM
0 responses
24 views
0 likes
Last Post seqadmin  
Started by seqadmin, 07-19-2024, 07:20 AM
0 responses
159 views
0 likes
Last Post seqadmin  
Started by seqadmin, 07-16-2024, 05:49 AM
0 responses
127 views
0 likes
Last Post seqadmin  
Working...
X