Originally posted by mudshark
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If you use EXCEL please keep in mind to change your format into the right way to pretend "excel gene name hacking"...(http://bioinformatics.fr/resources.p...rosoft%20Excel,) -
Hi Mike,
that will largely depend on whether you want a full isoform analysis or not. if not, you can simply correlate based on gene-based summarization values using e.g. R or even EXCEL.Leave a comment:
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Integrating RNAseq and Proteomics
Hi All,
I'm wondering if anybody has a good recommendation for a software tool or suite that effectively integrates and correlates RNAseq and Proteomics data from the same samples? Any pertinent literature and/or approaches are also welcome...Any help here would be greatly appreciated!
Thanks!
Mike
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NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification, detection...Yesterday, 06:46 AM -
Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?
Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating...10-14-2026, 09:55 AM
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