Hi,
I hope you can help.
I've been asked to search for novel haplotypes from a series of 454 sequenced amplicons.
I would like to know if there is any software that can search for potential haplotypes automatically, to at least provide a short list, to search through.
From my understanding of the AVA software this is fairly manual process to go through detected variants and assess their significance. I've come across similar Haplotype assessment papers, but nothing yet, on actually short listing them.
Many thanks in advance!
I hope you can help.
I've been asked to search for novel haplotypes from a series of 454 sequenced amplicons.
I would like to know if there is any software that can search for potential haplotypes automatically, to at least provide a short list, to search through.
From my understanding of the AVA software this is fairly manual process to go through detected variants and assess their significance. I've come across similar Haplotype assessment papers, but nothing yet, on actually short listing them.
Many thanks in advance!
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