So what is the update with this project https://github.com/nh13/samtools . Is it still faster than multi-threaded version of samtools ? Is this going to be a good substitute for Goby and Cram ?
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Has there been any success on mpileup speedup ? Is the parallelization by pthreads or MPI ?Comment
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Is the bcftools that come with samtools also multithreaded ?Comment
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There was no desire from the folks maintaining samtools to take over the development and add it. Sorry for the delayed response.Originally posted by narain View PostComment
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Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?
Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating...10-14-2026, 09:55 AM
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