Make Multi-fasta with annotations

[detq182]

Hi everyone

Im ending my work and i have a problem, how can i make that my multi-fasta file with the query sequence has a descriptions using the annotations hits that i get from blast, here is and example:

>CL44Contig4 Nascent polypeptide associated complex alpha
ACACGACGACTTCGAGCGGCCGAACCCGGGCAGGTACGAACGGGGGGCAAGCTA

Anyone try to make this before???

[azneto]

http://www.bioperl.org/wiki/HOWTO:SearchIO

[detq182]

hi
could you be more specific? im starting with perl.

[detq182]

please some help here.

i have a big problem i just cant make with bioperl this;
>CL56Contig1 Nascent polypeptide associated complex alpha
MVGGGNRRDEASFTVTNTNGFAALESLRKKKKSDKEKGSSKGGKGSSKAAGGGQNAEPEK
QVYLPGRQSSC..
its seem to be rigth but the sequence is a protein and my query is a DNA :
>CL56Contig1
ACACGACGACTTCGAGCGGCCGAACCCGGGCAGGTACGAACGGGGGGCAAGCTA..

how can i replace the protein secuence with the dna secuence? help me.

[azneto]

http://seqanswers.com/forums/showthread.php?t=10018