Hi I have been trying to upload this bam file
Which is located on this page
All I get is:
"http://slm22.ioo.ucl.ac.uk/~qncwork/Vanita-Ori.bam
An error occurred setting the metadata for this dataset. You may be able to set it manually or retry auto-detection.
error
format: bam, database: hg19
Info: Unable to fetch http://slm22.ioo.ucl.ac.uk/~qncwork/Vanita-Ori.bam
[Errno socket error] [Errno 110] Connection timed out"
I am happy to try UCSC but wanted to get a Variant's file from it to pass in Seatle Seq or something similar.
Then ultimately wanted to map any likely changes on UCSC with a MAF file.
But happy to look at the first stage which is getting BAM files uploaded.
Happy to look at other BAM analysis tools as well.
Can anyone help?
Which is located on this page
All I get is:
"http://slm22.ioo.ucl.ac.uk/~qncwork/Vanita-Ori.bam
An error occurred setting the metadata for this dataset. You may be able to set it manually or retry auto-detection.
error
format: bam, database: hg19
Info: Unable to fetch http://slm22.ioo.ucl.ac.uk/~qncwork/Vanita-Ori.bam
[Errno socket error] [Errno 110] Connection timed out"
I am happy to try UCSC but wanted to get a Variant's file from it to pass in Seatle Seq or something similar.
Then ultimately wanted to map any likely changes on UCSC with a MAF file.
But happy to look at the first stage which is getting BAM files uploaded.
Happy to look at other BAM analysis tools as well.
Can anyone help?
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