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  • bioinfo_
    Junior Member
    • Mar 2012
    • 5

    #1

    .png file not loading generated by fastx toolkit

    I am using fastx toolkit and i generated the stats file. However, my boxplot generated a .png file but ubuntu says: failed to load image. Is there anyway to solve this issue? I have image viewers like eog and gwenview but it still doesn't load.
  • bmejake
    Junior Member
    • May 2012
    • 6

    #2
    Just a thought... if you use the fastq_quality_boxplot_graph.sh with -p option, the file generated is not .png, but .ps, and can not be opened like a .png.

    Comment

    • bioinfo_
      Junior Member
      • Mar 2012
      • 5

      #3
      So I need to convert the .ps which is assumed to be .png to jpg or some other format?

      Comment

      • bmejake
        Junior Member
        • May 2012
        • 6

        #4
        Originally posted by bioinfo_ View Post
        So I need to convert the .ps which is assumed to be .png to jpg or some other format?
        No, just remove the -p option, and the files created should be .png, which shouldn't give you any difficulties when opening.

        Comment

        • GenoMax
          Senior Member
          • Feb 2008
          • 7142

          #5
          These may seem obvious but not sure if you have tried to check:

          1. Is the .png file non-zero byte size?
          2. If so have you tried to move it to some other machine to see if it opens there?

          Comment

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