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  • .png file not loading generated by fastx toolkit

    I am using fastx toolkit and i generated the stats file. However, my boxplot generated a .png file but ubuntu says: failed to load image. Is there anyway to solve this issue? I have image viewers like eog and gwenview but it still doesn't load.

  • #2
    Just a thought... if you use the fastq_quality_boxplot_graph.sh with -p option, the file generated is not .png, but .ps, and can not be opened like a .png.

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    • #3
      So I need to convert the .ps which is assumed to be .png to jpg or some other format?

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      • #4
        Originally posted by bioinfo_ View Post
        So I need to convert the .ps which is assumed to be .png to jpg or some other format?
        No, just remove the -p option, and the files created should be .png, which shouldn't give you any difficulties when opening.

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        • #5
          These may seem obvious but not sure if you have tried to check:

          1. Is the .png file non-zero byte size?
          2. If so have you tried to move it to some other machine to see if it opens there?

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