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  • nagaraj
    Junior Member
    • Jul 2012
    • 4

    denovo assembly

    explanation about denovo asembly
  • ranjani
    Junior Member
    • Jul 2012
    • 4

    #2
    Assembling short reads to create full-length sequences . de-novo assemblies are orders of magnitude slower and more memory intensive than mapping assemblies.

    Comment

    • maubp
      Peter (Biopython etc)
      • Jul 2009
      • 1544

      #3
      de novo is Latin, basically meaning "from new". So a de novo assembly is without knowing anything about the answer - compared to a reference guided assembly where you have a simple genome for guidance.

      Comment

      • mgogol
        Senior Member
        • Mar 2008
        • 197

        #4
        I love that such an incomplete question (phrase) got two thoughtful responses.

        Comment

        • GenoMax
          Senior Member
          • Feb 2008
          • 7142

          #5
          His/her ISP may be charging by the word to access the internet

          Three posts (so far) by that user have less than 5 words each.

          Originally posted by mgogol View Post
          I love that such an incomplete question (phrase) got two thoughtful responses.

          Comment

          • mgogol
            Senior Member
            • Mar 2008
            • 197

            #6
            Ha ha, good call.

            On biostars, somebody would have deleted or closed it. I suppose there's a place for both approaches.

            Comment

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