Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • nagaraj
    Junior Member
    • Jul 2012
    • 4

    #1

    denovo assembly

    explanation about denovo asembly
  • ranjani
    Junior Member
    • Jul 2012
    • 4

    #2
    Assembling short reads to create full-length sequences . de-novo assemblies are orders of magnitude slower and more memory intensive than mapping assemblies.

    Comment

    • maubp
      Peter (Biopython etc)
      • Jul 2009
      • 1544

      #3
      de novo is Latin, basically meaning "from new". So a de novo assembly is without knowing anything about the answer - compared to a reference guided assembly where you have a simple genome for guidance.

      Comment

      • mgogol
        Senior Member
        • Mar 2008
        • 197

        #4
        I love that such an incomplete question (phrase) got two thoughtful responses.

        Comment

        • GenoMax
          Senior Member
          • Feb 2008
          • 7142

          #5
          His/her ISP may be charging by the word to access the internet

          Three posts (so far) by that user have less than 5 words each.

          Originally posted by mgogol View Post
          I love that such an incomplete question (phrase) got two thoughtful responses.

          Comment

          • mgogol
            Senior Member
            • Mar 2008
            • 197

            #6
            Ha ha, good call.

            On biostars, somebody would have deleted or closed it. I suppose there's a place for both approaches.

            Comment

            Latest Articles

            Collapse

            • kinpict.com
              Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
              by kinpict.com
              The part about this topic feels surprisingly grounded, and the details on the page is the bit that made me slow down. I’d keep <a href="https://kinpict.com/">ai family photo generator</a> bookmarked for later.
              Today, 06:37 PM
            • SEQadmin2
              16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
              by SEQadmin2





              NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
              10-30-2026, 06:46 AM

            ad_right_rmr

            Collapse

            News

            Collapse

            Topics Statistics Last Post
            Started by SEQadmin2, 11-12-2026, 07:59 AM
            0 responses
            27 views
            0 reactions
            Last Post SEQadmin2  
            Started by SEQadmin2, 11-05-2026, 09:25 AM
            0 responses
            35 views
            0 reactions
            Last Post SEQadmin2  
            Started by SEQadmin2, 11-03-2026, 11:54 AM
            2 responses
            56 views
            0 reactions
            Last Post kinpict.com  
            Started by SEQadmin2, 10-28-2026, 09:57 AM
            0 responses
            175 views
            0 reactions
            Last Post SEQadmin2  
            Working...