Hi all
I have chromosome coordinates (e.g. 5233922 to 5235189 of chr18). how can I get the sequence corresponding to this region ?
Like this I have huge file containing chr1 to chr21 and chr X and chrY. Is there any platform where I can give the coordinate file and that give me the desired nucleotide sequences ?
Is there any difference between using hg18 human reference genome or hg19 for the same purpose. Because the experiment has used hg18 assembly to generate the coordinates (which they have given in supplementary material).
Thanks in advance.
KD
I have chromosome coordinates (e.g. 5233922 to 5235189 of chr18). how can I get the sequence corresponding to this region ?
Like this I have huge file containing chr1 to chr21 and chr X and chrY. Is there any platform where I can give the coordinate file and that give me the desired nucleotide sequences ?
Is there any difference between using hg18 human reference genome or hg19 for the same purpose. Because the experiment has used hg18 assembly to generate the coordinates (which they have given in supplementary material).
Thanks in advance.
KD
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