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  • gsMapper internal error (exit status 256)

    Hi,

    I used gsMapper with a fasta file as reference and fasq data to map.
    At "generating output" step, I got this error message : an internal error (exit status 256) has occured in the computation.
    Please could you help me to know what it means ? thanks a lot

  • #2
    gsMapper 2.7 is buggy, 454 LS could not fix the problems for 6 mo and I had to drop back to 2.5p1

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    • #3
      Whatever version of newbler, such an error basically means 'sorry, a bug was encountered'. You can try again, try again using slightly different settings/dataset, try again using a different version of newbler. You may contact your FAS and report the problem, but I've not heard many success stories there (exceptions do happen).

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      • #4
        Thanks for your reply

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