hi,
we can open indexed bam file with:
File bam, index,
SAMFileReader reader = new SAMFileReader(bam, index);
or
SAMFileReader reader = new SAMFileReader(bam);
but after
reader.close();
bam file is closed but index file still open. I tested to delete the XXX.bam or xxx.bai.
how to close index file (xxx.bai)?
jay
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Metagenomics has improved the way researchers study microorganisms across diverse environments. Historically, studying microorganisms relied on culturing them in the lab, a method that limits the investigation of many species since most are unculturable1. Metagenomics overcomes these issues by allowing the study of microorganisms regardless of their ability to be cultured or the environments they inhabit. Over time, the field has evolved, especially with the advent...-
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