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  • tamari
    Member
    • Oct 2012
    • 12

    Network construction from time points data

    Hi,

    I have expression data of few genes in a network that was produced under two different conditions, each condtion has 5 time points. What I would like to do is to construct a network under each condtion to see if there is some change in the network like different functions of TFs or other genes or different connected components.

    Is there a tool that I can use for such purpose?

    Thanks!
    Tamari
  • dpryan
    Devon Ryan
    • Jul 2011
    • 3478

    #2
    I assume you want to create a gene covariation network, in which case look into WGCNA (it's in bioconductor I think, if not just search for the publication in pubmed).

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