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see below..
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Last edited by moritz1; 02-25-2016, 05:45 AM. -
You can install a local instance of galaxy that way you don't have to load it onto their server. -
I have tried Bpipe and it seems to work well. It takes some time to learn and get used to its way of doing things.
You can also write a shell script and I find it to be easier to understand..
But if your users will be doctors who might not have any unix experience. Anything that has a web interface will be much easier to use than unix environment..Comment
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I realize you are likely done with your thesis, so this information is for those who may stumble upon this thread. I would suggest to take a look at the latest development: NextflowWorkbench. Here's a preprint that discusses this new workflow system:
NextflowWorkbench: Reproducible and Reusable Workflows for Beginners and Experts
Jason P Kurs, Manuele Simi, Fabien Campagne
bioRxiv doi: http://dx.doi.org/10.1101/041236Comment
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While isolating and preparing single cells for sequencing was historically the bottleneck, recent technological advancements have shifted the challenge to data analysis. This highlights the rapidly evolving nature of single-cell sequencing. The inherent complexity of single-cell analysis has intensified with the surge in data volume and the incorporation of diverse and more complex datasets. This article explores the challenges in analysis, examines common pitfalls, offers...Today, 07:15 AM -
Technological advances have led to drastic improvements in the field of precision medicine, enabling more personalized approaches to treatment. This article explores four leading groups that are overcoming many of the challenges of genomic profiling and precision medicine through their innovative platforms and technologies.
Somatic Genomics
“We have such a tremendous amount of genetic diversity that exists within each of us, and not just between us as individuals,”...05-24-2024, 01:16 PM
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